ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4eg2F4 - ECOD Domain | ECOD

ECOD/Domains/e4eg2F4

e4eg2F4

UID: 001202185

PDB

Range: F:189-295
PDB: 4EG2 chain F(all domains)
UniProt: Q9KSM5 (all domains)
Gene: cdd

Molecule: Cytidine deaminase

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_2(2492.1.1.15)

Ligands

in contact, ≤ 4 Å

UridineURI
drugDrugBank DB02745

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF08211dCMP_cyt_deam_2

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

ECOD PDB View: 4EG2 RCSB PDB: 4EG2 PDBe: 4EG2 UniProt: Q9KSM5

Downloads

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Drug annotations from DrugDomain.