ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fxxB3 - ECOD Domain | ECOD

ECOD/Domains/e4fxxB3

e4fxxB3

UID: 001202253

PDB

Range: B:36-131
PDB: 4FXX chain B(all domains)
UniProt: Q15637 (all domains)
Gene: SF1

Molecule: Splicing factor 1

3D Structure

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Related Domains

Browse other domains in SF1-HH →

Classification

AArchitectureextended segments(a.20)

XX-groupSplicing factor 1 N-terminal domain(3568)

HH-groupSplicing factor 1 N-terminal domain(3568.1)

TT-groupSplicing factor 1 N-terminal domain(3568.1.1)

FFamilySF1-HH(3568.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Imidazole, Malonate Ion)

ImidazoleIMD
DrugBank DB03366
Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Splicing factor 1 helix-hairpin domain

External Links

ECOD PDB View: 4FXX RCSB PDB: 4FXX PDBe: 4FXX UniProt: Q15637

Downloads

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