ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1aym11 - ECOD Domain | ECOD

ECOD/Domains/e1aym11

e1aym11

UID: 000001204

RepresentativePDB

Range: 1:1-285
PDB: 1AYM chain 1(all domains)
UniProt: Q82122 (all domains)

Molecule: HUMAN RHINOVIRUS 16 COAT PROTEIN

3D Structure

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Related Domains

Browse other domains in Rhv_5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv_5(10.2.1.69)

Ligands

in contact, ≤ 4 Å

Lauric acidDAO
drugDrugBank DB03017
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Picornavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1AYM RCSB PDB: 1AYM PDBe: 1AYM UniProt: Q82122

Downloads

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