ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3soqA3 - ECOD Domain | ECOD

ECOD/Domains/e3soqA3

e3soqA3

UID: 001204803

PDB

Range: A:20-281
PDB: 3SOQ chain A(all domains)
UniProt: O75581 (all domains)
Gene: LRP6

Molecule: Low-density lipoprotein receptor-related protein 6

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ldl_recept_b →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyLdl_recept_b(5.1.3.2)

Ligands

in contact, ≤ 4 Å

alpha-L-fucoseFUC
drugDrugBank DB04473
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF00058Ldl_recept_b

Low-density lipoprotein receptor repeat class B

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 3SOQ RCSB PDB: 3SOQ PDBe: 3SOQ UniProt: O75581

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ion

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.