ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nt0A5 - ECOD Domain | ECOD

ECOD/Domains/e1nt0A5

e1nt0A5

UID: 001204822

PDB

Range: A:120-162
PDB: 1NT0 chain A(all domains)
UniProt: Q9JJS8 (all domains)
Gene: Masp2

Molecule: mannose-binding protein associated serine protease-2

3D Structure

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Related Domains

Browse other domains in EGF_CA →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF_CA(389.1.1.7)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Calcium-binding EGF domain

ClanCL0001EGF

External Links

ECOD PDB View: 1NT0 RCSB PDB: 1NT0 PDBe: 1NT0 UniProt: Q9JJS8

Downloads

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