ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d4jB4 - ECOD Domain | ECOD

ECOD/Domains/e3d4jB4

e3d4jB4

UID: 001207925

PDB

Range: B:194-396
PDB: 3D4J chain B(all domains)
UniProt: P53602 (all domains)
Gene: MVD

Molecule: Diphosphomevalonate decarboxylase

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGHMP Kinase, C-terminal domain(304.1)

TT-groupGHMP Kinase, C-terminal domain(304.1.1)

FFamilyMDD_C(304.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Mevalonate 5-diphosphate decarboxylase C-terminal domain

ClanCL0677GHMP_C

External Links

ECOD PDB View: 3D4J RCSB PDB: 3D4J PDBe: 3D4J UniProt: P53602

Downloads

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