ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gyqB4 - ECOD Domain | ECOD

ECOD/Domains/e3gyqB4

e3gyqB4

UID: 001208219

PDB

Range: B:101-268
PDB: 3GYQ chain B(all domains)
UniProt: P18644 (all domains)
Gene: tsnR

Molecule: rRNA (adenosine-2'-O-)-methyltransferase

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

ECOD PDB View: 3GYQ RCSB PDB: 3GYQ PDBe: 3GYQ UniProt: P18644

Downloads

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