ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hrdD4 - ECOD Domain | ECOD

ECOD/Domains/e3hrdD4

e3hrdD4

UID: 001210267

PDB

Range: D:82-160
PDB: 3HRD chain D(all domains)
UniProt: Q0QLF3 (all domains)
Gene: ndhS

Molecule: Nicotinate dehydrogenase small FeS subunit

3D Structure

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Related Domains

Browse other domains in Fer2_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupCO dehydrogenase ISP C-domain like(179)

HH-groupCO dehydrogenase ISP C-domain like(179.1)

TT-groupCO dehydrogenase ISP C-domain like(179.1.1)

FFamilyFer2_2(179.1.1.1)

Ligands

in contact, ≤ 4 Å

Pterin Cytosine DinucleotideMCN
drugDrugBank DB03300
FE2/S2 (INORGANIC) CLUSTERFES

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

[2Fe-2S] binding domain

ClanCL0486Fer2

External Links

ECOD PDB View: 3HRD RCSB PDB: 3HRD PDBe: 3HRD UniProt: Q0QLF3

Downloads

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