ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vqiE10 - ECOD Domain | ECOD

ECOD/Domains/e3vqiE10

e3vqiE10

UID: 001210409

PDB

Range: E:133-190
PDB: 3VQI chain E(all domains)
UniProt: J3QW33 (all domains)

Molecule: Atg5

3D Structure

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Related Domains

Browse other domains in ATG5_HBR →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical domain in autophagy protein 5(3431)

HH-groupHelical domain in autophagy protein 5(3431.1)

TT-groupHelical domain in autophagy protein 5(3431.1.1)

FFamilyATG5_HBR(3431.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (HEPES, Sulfate ion)

HEPESEPE
DrugBank DB16872
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20637ATG5_HBR

Autophagy protein ATG5, alpha-helical bundle region

External Links

ECOD PDB View: 3VQI RCSB PDB: 3VQI PDBe: 3VQI UniProt: J3QW33

Downloads

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