ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xafA6 - ECOD Domain | ECOD

ECOD/Domains/e2xafA6

e2xafA6

UID: 001212516

PDB

Range: A:640-746
PDB: 2XAF chain A(all domains)
UniProt: O60341 (all domains)
Gene: KDM1A

Molecule: LYSINE-SPECIFIC HISTONE DEMETHYLASE 1

3D Structure

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Related Domains

Browse other domains in Amino_oxidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD-linked reductases-C(244.1)

TT-groupFAD-linked reductases-C(244.1.1)

FFamilyAmino_oxidase(244.1.1.6)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147within 5 Å only
3-(4-BROMOPHENYL)PROPANAMIDETCF

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01593Amino_oxidase

Flavin containing amine oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2XAF RCSB PDB: 2XAF PDBe: 2XAF UniProt: O60341

Downloads

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