ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ssaA7 - ECOD Domain | ECOD

ECOD/Domains/e3ssaA7

e3ssaA7

UID: 001212935

PDB

Range: A:12-76
PDB: 3SSA chain A(all domains)
UniProt: Q60187 (all domains)
Gene: atpB

Molecule: V-type ATP synthase beta chain

3D Structure

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Related Domains

Browse other domains in ATP-synt_ab_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyATP-synt_ab_N(1.1.7.17)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Triethylene glycol, Glycerol)

Triethylene glycolPGE
DrugBank DB02327within 5 Å only
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02874ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 3SSA RCSB PDB: 3SSA PDBe: 3SSA UniProt: Q60187

Downloads

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