ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3okxB2 - ECOD Domain | ECOD

ECOD/Domains/e3okxB2

e3okxB2

UID: 001212993

PDB

Range: B:3-151
PDB: 3OKX chain B(all domains)
UniProt: Q6NDF6 (all domains)
Gene: RPA0152

Molecule: YaeB-like protein RPA0152

3D Structure

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Related Domains

Browse other domains in TrmO →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyTrmO(1.1.7.13)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

tRNA-methyltransferase O N-terminal domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 3OKX RCSB PDB: 3OKX PDBe: 3OKX UniProt: Q6NDF6

Downloads

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