ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3r5pA2 - ECOD Domain | ECOD

ECOD/Domains/e3r5pA2

e3r5pA2

UID: 001217283

PDB

Range: A:39-151
PDB: 3R5P chain A(all domains)
UniProt: P9WP15 (all domains)
Gene: ddn

Molecule: Deazaflavin-dependent nitroreductase

3D Structure

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Related Domains

Browse other domains in F420H2_quin_red →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyF420H2_quin_red(1.1.5.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04075F420H2_quin_red

F420H(2)-dependent quinone reductase

ClanCL0336FMN-binding

External Links

ECOD PDB View: 3R5P RCSB PDB: 3R5P PDBe: 3R5P UniProt: P9WP15

Downloads

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