ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2biiB3 - ECOD Domain | ECOD

ECOD/Domains/e2biiB3

e2biiB3

UID: 001220731

PDB

Range: B:64-298
PDB: 2BII chain B(all domains)
UniProt: P49050 (all domains)
Gene: YNR1

Molecule: NITRATE REDUCTASE [NADPH]

3D Structure

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Related Domains

Browse other domains in Oxidored_molyb →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupSulfite oxidase, middle catalytic domain(221.1.3)

FFamilyOxidored_molyb(221.1.3.1)

Ligands

in contact, ≤ 4 Å

(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(IV)MTV

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF00174Oxidored_molyb

Oxidoreductase molybdopterin binding domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 2BII RCSB PDB: 2BII PDBe: 2BII UniProt: P49050

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.