ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2biiB4 - ECOD Domain | ECOD

ECOD/Domains/e2biiB4

e2biiB4

UID: 001220732

PDB

Range: B:299-478
PDB: 2BII chain B(all domains)
UniProt: P49050 (all domains)
Gene: YNR1

Molecule: NITRATE REDUCTASE [NADPH]

3D Structure

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Related Domains

Browse other domains in Mo-co_dimer →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyMo-co_dimer(11.1.1.55)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(IV)MTV
within 5 Å only

+ 2 additives (Sulfate ion, Glycerol)

Sulfate ionSO4

Pfam Families

PF03404Mo-co_dimer

Mo-co oxidoreductase dimerisation domain

ClanCL0159E-set

External Links

ECOD PDB View: 2BII RCSB PDB: 2BII PDBe: 2BII UniProt: P49050

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.