ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3skuF6 - ECOD Domain | ECOD

ECOD/Domains/e3skuF6

e3skuF6

UID: 001222158

PDB

Range: F:165-241
PDB: 3SKU chain F(all domains)
UniProt: Q15223 (all domains)
Gene: NECTIN1

Molecule: Poliovirus receptor-related protein 1

3D Structure

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Related Domains

Browse other domains in C2-set_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC2-set_2(11.1.1.108)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08205C2-set_2

CD80-like C2-set immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 3SKU RCSB PDB: 3SKU PDBe: 3SKU UniProt: Q15223

Downloads

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