ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3skuE5 - ECOD Domain | ECOD

ECOD/Domains/e3skuE5

e3skuE5

UID: 001222161

PDB

Range: E:32-153
PDB: 3SKU chain E(all domains)
UniProt: Q15223 (all domains)
Gene: NECTIN1

Molecule: Poliovirus receptor-related protein 1

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 3SKU RCSB PDB: 3SKU PDBe: 3SKU UniProt: Q15223

Downloads

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