ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4fyiB2 - ECOD Domain | ECOD

ECOD/Domains/e4fyiB2

e4fyiB2

UID: 001222793

PDB

Range: B:11-150
PDB: 4FYI chain B(all domains)
UniProt: O35820 (all domains)
Gene: Dnph1

Molecule: Deoxyribonucleoside 5'-monophosphate N-glycosidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

N-cyclopentyladenosine 5'-(dihydrogen phosphate)6C6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 4FYI RCSB PDB: 4FYI PDBe: 4FYI UniProt: O35820

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure