ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fykD3 - ECOD Domain | ECOD

ECOD/Domains/e4fykD3

e4fykD3

UID: 001222806

PDB

Range: D:11-150
PDB: 4FYK chain D(all domains)
UniProt: O35820 (all domains)
Gene: Dnph1

Molecule: Deoxyribonucleoside 5'-monophosphate N-glycosidase

3D Structure

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Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

ADENOSINE -5'-THIO-MONOPHOSPHATESRA

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 4FYK RCSB PDB: 4FYK PDBe: 4FYK UniProt: O35820

Downloads

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