ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ndfB3 - ECOD Domain | ECOD

ECOD/Domains/e4ndfB3

e4ndfB3

UID: 001226162

PDB

Range: B:161-315
PDB: 4NDF chain B(all domains)
UniProt: Q7Z2E3 (all domains)
Gene: APTX

Molecule: Aprataxin

3D Structure

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Related Domains

Browse other domains in DcpS_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupHIT-like(312)

HH-groupHIT-related(312.1)

TT-groupHIT-related(312.1.1)

FFamilyDcpS_C(312.1.1.8)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
MercaptoethanolBME
drugDrugBank DB03345

Shown in the structure viewer.

Pfam Families

Scavenger mRNA decapping enzyme C-term binding

ClanCL0265HIT

External Links

ECOD PDB View: 4NDF RCSB PDB: 4NDF PDBe: 4NDF UniProt: Q7Z2E3

Downloads

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Drug annotations from DrugDomain.