ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3sfxB2 - ECOD Domain | ECOD

ECOD/Domains/e3sfxB2

e3sfxB2

UID: 001226522

PDB

Range: B:2-241,B:263-349,B:371-519
PDB: 3SFX chain B(all domains)
UniProt: Q55QV6 (all domains)

Molecule: Cryptococcus neoformans protein farnesyltransferase beta subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in Prenyltrans →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyPrenyltrans(109.2.1.1)

Ligands

in contact, ≤ 4 Å

(2R)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3FX
[(3,7,11-TRIMETHYL-DODECA-2,6,10-TRIENYLOXYCARBAMOYL)-METHYL]-PHOSPHONIC ACIDFII
6-[(S)-AMINO(4-CHLOROPHENYL)(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]-4-(3-CHLOROPHENYL)-1-METHYLQUINOLIN-2(1H)-ONEJAN
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF00432Prenyltrans

Prenyltransferase alpha-alpha toroid domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 3SFX RCSB PDB: 3SFX PDBe: 3SFX UniProt: Q55QV6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

Shown in the structure viewer.