ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3sfyB2 - ECOD Domain | ECOD

ECOD/Domains/e3sfyB2

e3sfyB2

UID: 001226523

PDB

Range: B:2-241,B:263-349,B:371-519
PDB: 3SFY chain B(all domains)
UniProt: Q55QV6 (all domains)

Molecule: Cryptococcus neoformans protein farnesyltransferase beta subunit

3D Structure

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Related Domains

Browse other domains in Prenyltrans →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyPrenyltrans(109.2.1.1)

Ligands

in contact, ≤ 4 Å

(2R)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3FX
N-(2-{(4-bromophenyl)[(1-methyl-1H-imidazol-5-yl)methyl]amino}ethyl)-1-methyl-N-(2-methylbenzyl)-1H-imidazole-4-sulfonamide3FY
[(3,7,11-TRIMETHYL-DODECA-2,6,10-TRIENYLOXYCARBAMOYL)-METHYL]-PHOSPHONIC ACIDFII
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF00432Prenyltrans

Prenyltransferase alpha-alpha toroid domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 3SFY RCSB PDB: 3SFY PDBe: 3SFY UniProt: Q55QV6

Downloads

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Sulfate ionSO4

Shown in the structure viewer.