ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i04B8 - ECOD Domain | ECOD

ECOD/Domains/e3i04B8

e3i04B8

UID: 001227962

PDB

Range: B:425-674
PDB: 3I04 chain B(all domains)
UniProt: P27989 (all domains)

Molecule: Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit beta

3D Structure

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Related Domains

Browse other domains in Prismane →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like domain in prismane-like proteins(7586)

HH-groupRossmann-like domain in prismane-like proteins(7586.1)

TT-groupRossmann-like domain in prismane-like proteins(7586.1.1)

FFamilyPrismane(7586.1.1.1)

Ligands

in contact, ≤ 4 Å

Cyanide ionCYN
Iron/sulfur clusterSF4
FE(4)-NI(1)-S(4) CLUSTERXCC

+ 1 additive (Glycerin)

Pfam Families

PF03063Prismane

Prismane/CO dehydrogenase family

ClanCL0113GT-B

External Links

ECOD PDB View: 3I04 RCSB PDB: 3I04 PDBe: 3I04 UniProt: P27989

Downloads

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GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.