ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vfjC2 - ECOD Domain | ECOD

ECOD/Domains/e2vfjC2

e2vfjC2

UID: 001228380

PDB

Range: C:5-359
PDB: 2VFJ chain C(all domains)
UniProt: P21580 (all domains)
Gene: TNFAIP3

Molecule: TUMOR NECROSIS FACTOR

3D Structure

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Related Domains

Browse other domains in OTU →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyOTU(219.1.1.15)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

OTU-like cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 2VFJ RCSB PDB: 2VFJ PDBe: 2VFJ UniProt: P21580

Downloads

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Drug annotations from DrugDomain.