ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y6eB2 - ECOD Domain | ECOD

ECOD/Domains/e2y6eB2

e2y6eB2

UID: 001228388

PDB

Range: B:296-483,B:775-930
PDB: 2Y6E chain B(all domains)
UniProt: Q13107 (all domains)
Gene: USP4

Molecule: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4

3D Structure

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Related Domains

Browse other domains in UCH →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 2Y6E RCSB PDB: 2Y6E PDBe: 2Y6E UniProt: Q13107

Downloads

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