ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1l9mB5 - ECOD Domain | ECOD

ECOD/Domains/e1l9mB5

e1l9mB5

UID: 001228500

PDB

Range: B:141-461
PDB: 1L9M chain B(all domains)
UniProt: Q08188 (all domains)
Gene: TGM3

Molecule: Protein-glutamine glutamyltransferase E3

3D Structure

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Related Domains

Browse other domains in Transglut_core →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyTransglut_core(219.1.1.13)

Ligands

in contact, ≤ 4 Å

Bromide ionBR
Calcium ionCA
metal
Chloride ionCL

Pfam Families

PF01841Transglut_core

Transglutaminase-like superfamily

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 1L9M RCSB PDB: 1L9M PDBe: 1L9M UniProt: Q08188

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.