ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gyiA4 - ECOD Domain | ECOD

ECOD/Domains/e4gyiA4

e4gyiA4

UID: 001229012

PDB

Range: A:96-342
PDB: 4GYI chain A(all domains)
UniProt: G0S5R3 (all domains)
Gene: CTHT_0033330

Molecule: Rio2 kinase

3D Structure

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Related Domains

Browse other domains in RIO1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyRIO1(206.1.1.9)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

RIO domain

ClanCL0016PKinase

External Links

ECOD PDB View: 4GYI RCSB PDB: 4GYI PDBe: 4GYI UniProt: G0S5R3

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.