ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3fefD3 - ECOD Domain | ECOD

ECOD/Domains/e3fefD3

e3fefD3

UID: 001230753

PDB

Range: D:7-173
PDB: 3FEF chain D(all domains)
UniProt: P39130 (all domains)
Gene: lplD

Molecule: Putative glucosidase lplD, ALPHA-GALACTURONIDASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGlyco_hydro_4(2003.1.1.26)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02056Glyco_hydro_4

Family 4 glycosyl hydrolase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3FEF RCSB PDB: 3FEF PDBe: 3FEF UniProt: P39130

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure