ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p4xA3 - ECOD Domain | ECOD

ECOD/Domains/e3p4xA3

e3p4xA3

UID: 001233348

PDB

Range: A:59-284
PDB: 3P4X chain A(all domains)
UniProt: O51934 (all domains)
Gene: rgy

Molecule: reverse gyrase helicase-like domain

3D Structure

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Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3P4X RCSB PDB: 3P4X PDBe: 3P4X UniProt: O51934

Downloads

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