ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cdgA11 - ECOD Domain | ECOD

ECOD/Domains/e4cdgA11

e4cdgA11

UID: 001233367

PDB

Range: A:856-1071
PDB: 4CDG chain A(all domains)
UniProt: P54132 (all domains)
Gene: BLM

Molecule: BLOOM SYNDROME PROTEIN

3D Structure

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Related Domains

Browse other domains in Helicase_C,RecQ_Zn_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C,RecQ_Zn_bind(2004.1.1.33)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

PF16124RecQ_Zn_bind

RecQ zinc-binding

External Links

ECOD PDB View: 4CDG RCSB PDB: 4CDG PDBe: 4CDG UniProt: P54132

Downloads

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