ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3czpB3 - ECOD Domain | ECOD

ECOD/Domains/e3czpB3

e3czpB3

UID: 001233468

PDB

Range: B:1-163,B:186-235
PDB: 3CZP chain B(all domains)
UniProt: Q9HYF1 (all domains)
Gene: PA3455

Molecule: Putative polyphosphate kinase 2

3D Structure

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Related Domains

Browse other domains in PPK2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyPPK2(2004.1.1.109)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Glycerin, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462within 5 Å only
1,2-ETHANEDIOL

Pfam Families

Polyphosphate kinase 2 (PPK2)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3CZP RCSB PDB: 3CZP PDBe: 3CZP UniProt: Q9HYF1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.