ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ca9A4 - ECOD Domain | ECOD

ECOD/Domains/e2ca9A4

e2ca9A4

UID: 001234141

PDB

Range: A:62-146
PDB: 2CA9 chain A(all domains)
UniProt: O25896 (all domains)
Gene: HP_1338

Molecule: PUTATIVE NICKEL-RESPONSIVE REGULATOR

3D Structure

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Related Domains

Browse other domains in NikR_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupACT-like(304.8)

TT-groupACT-like(304.8.1)

FFamilyNikR_C(304.8.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NikR C terminal nickel binding domain

ClanCL0070ACT

External Links

ECOD PDB View: 2CA9 RCSB PDB: 2CA9 PDBe: 2CA9 UniProt: O25896

Downloads

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