ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2z4wB2 - ECOD Domain | ECOD

ECOD/Domains/e2z4wB2

e2z4wB2

UID: 001234681

PDB

Range: B:25-314
PDB: 2Z4W chain B(all domains)
UniProt: Q12051 (all domains)
Gene: BTS1

Molecule: Geranylgeranyl pyrophosphate synthetase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

[(6E,11E)-2,6,12,16-tetramethylheptadeca-2,6,11,15-tetraene-9,9-diyl]bis(phosphonic acid)749
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 2Z4W RCSB PDB: 2Z4W PDBe: 2Z4W UniProt: Q12051

Downloads

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