ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ikbB2 - ECOD Domain | ECOD

ECOD/Domains/e4ikbB2

e4ikbB2

UID: 001234784

PDB

Range: B:15-141
PDB: 4IKB chain B(all domains)
UniProt: Q9Y5W9 (all domains)
Gene: SNX11

Molecule: Sorting nexin-11

3D Structure

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Related Domains

Browse other domains in PX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPX domain(277)

HH-groupPX domain(277.1)

TT-groupPX domain(277.1.1)

FFamilyPX(277.1.1.1)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400PE5
drugDrugBank DB03556
Chloride ionCL
Sodium ion

Pfam Families

PX domain

External Links

ECOD PDB View: 4IKB RCSB PDB: 4IKB PDBe: 4IKB UniProt: Q9Y5W9

Downloads

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metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.