ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2jhnB3 - ECOD Domain | ECOD

ECOD/Domains/e2jhnB3

e2jhnB3

UID: 001235368

PDB

Range: B:94-295
PDB: 2JHN chain B(all domains)
UniProt: O28163 (all domains)
Gene: AF_2117

Molecule: 3-METHYLADENINE DNA-GLYCOSYLASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in HhH-GPD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupDNA-glycosylase(102.1.2)

FFamilyHhH-GPD(102.1.2.1)

Ligands

in contact, ≤ 4 Å

Mercuribenzoic AcidMBO
drugDrugBank DB03975
Sodium ionNA
metal

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL

Pfam Families

PF00730HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

ClanCL0198HHH

External Links

ECOD PDB View: 2JHN RCSB PDB: 2JHN PDBe: 2JHN UniProt: O28163

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

2-(N-morpholino)ethanesulfonic acidMES

DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.