ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qvdH3 - ECOD Domain | ECOD

ECOD/Domains/e3qvdH3

e3qvdH3

UID: 001236688

PDB

Range: H:2-135
PDB: 3QVD chain H(all domains)
UniProt: Q9UWP7 (all domains)

Molecule: Rubrerythrin

3D Structure

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Related Domains

Browse other domains in Rubrerythrin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupFerritin(150.1.1)

FFamilyRubrerythrin(150.1.1.3)

Ligands

in contact, ≤ 4 Å

Hydrogen peroxidePEO
drugDrugBank DB11091
FE (III) IONFE
metal
FE (II) IONFE2

Pfam Families

PF02915Rubrerythrin

Rubrerythrin

ClanCL0044Ferritin

External Links

ECOD PDB View: 3QVD RCSB PDB: 3QVD PDBe: 3QVD UniProt: Q9UWP7

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.