ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gvhB2 - ECOD Domain | ECOD

ECOD/Domains/e4gvhB2

e4gvhB2

UID: 001239255

PDB

Range: B:1-341
PDB: 4GVH chain B(all domains)
UniProt: Q8ZQ06 (all domains)
Gene: nagZ

Molecule: Beta-hexosaminidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_3(2002.1.1.39)

Ligands

in contact, ≤ 4 Å

5-fluoro-N-acetyl-alpha-D-glucosamine0XY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00933Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4GVH RCSB PDB: 4GVH PDBe: 4GVH UniProt: Q8ZQ06

Downloads

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