ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k13C2 - ECOD Domain | ECOD

ECOD/Domains/e3k13C2

e3k13C2

UID: 001240125

PDB

Range: C:350-637
PDB: 3K13 chain C(all domains)
UniProt: Q8ABD0 (all domains)
Gene: BT_0180

Molecule: 5-methyltetrahydrofolate-homocysteine methyltransferase

3D Structure

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Related Domains

Browse other domains in Pterin_bind →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPterin_bind(2002.1.1.36)

Ligands

in contact, ≤ 4 Å

Levomefolic acidTHH
drugDrugBank DB11256
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF00809Pterin_bind

Pterin binding enzyme

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3K13 RCSB PDB: 3K13 PDBe: 3K13 UniProt: Q8ABD0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.