ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3s9yD2 - ECOD Domain | ECOD

ECOD/Domains/e3s9yD2

e3s9yD2

UID: 001240617

PDB

Range: D:2-321
PDB: 3S9Y chain D(all domains)
UniProt: Q8IJH3 (all domains)
Gene: PF3D7_1023200

Molecule: Orotidine 5'-phosphate decarboxylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

6-amino-5-fluorouridine 5'-(dihydrogen phosphate)FNU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3S9Y RCSB PDB: 3S9Y PDBe: 3S9Y UniProt: Q8IJH3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure