ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b0yA6 - ECOD Domain | ECOD

ECOD/Domains/e3b0yA6

e3b0yA6

UID: 001240954

PDB

Range: A:154-339
PDB: 3B0Y chain A(all domains)
UniProt: Q5SJ64 (all domains)
Gene: TTHA1150

Molecule: DNA polymerase beta family (X family)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_thumb →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDNA_pol_B_thumb(316.1.1.23)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181
Calcium ionCA
metal
Chloride ionCL

Pfam Families

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

External Links

ECOD PDB View: 3B0Y RCSB PDB: 3B0Y PDBe: 3B0Y UniProt: Q5SJ64

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.