ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4f40B2 - ECOD Domain | ECOD

ECOD/Domains/e4f40B2

e4f40B2

UID: 001242133

PDB

Range: B:3-284
PDB: 4F40 chain B(all domains)
UniProt: P22045 (all domains)
Gene: P100/11E

Molecule: Prostaglandin f2-alpha synthase/D-arabinose dehydrogenase

3D Structure

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Related Domains

Browse other domains in Aldo_ket_red →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAldo_ket_red(2002.1.1.13)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, 1,2-ETHANEDIOL)

Citric acidCIT
DrugBank DB04272
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00248Aldo_ket_red

Aldo/keto reductase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4F40 RCSB PDB: 4F40 PDBe: 4F40 UniProt: P22045

Downloads

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