ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3vkaB2 - ECOD Domain | ECOD

ECOD/Domains/e3vkaB2

e3vkaB2

UID: 001242165

PDB

Range: B:17-268
PDB: 3VKA chain B(all domains)
UniProt: A0A011 (all domains)
Gene: moeO5

Molecule: MoeO5

3D Structure

Loading viewer...

Related Domains

Browse other domains in PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPcrB(2002.1.1.78)

Ligands

in contact, ≤ 4 Å

(2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acidFPQ
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PcrB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3VKA RCSB PDB: 3VKA PDBe: 3VKA UniProt: A0A011

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure