ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vkdB2 - ECOD Domain | ECOD

ECOD/Domains/e3vkdB2

e3vkdB2

UID: 001242170

PDB

Range: B:17-268
PDB: 3VKD chain B(all domains)
UniProt: A0A011 (all domains)
Gene: moeO5

Molecule: MoeO5

3D Structure

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Related Domains

Browse other domains in PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPcrB(2002.1.1.78)

Ligands

in contact, ≤ 4 Å

(2R)-3-(phosphonooxy)-2-{[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}propanoic acidFPQ
Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PcrB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3VKD RCSB PDB: 3VKD PDBe: 3VKD UniProt: A0A011

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.