ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ddbC4 - ECOD Domain | ECOD

ECOD/Domains/e2ddbC4

e2ddbC4

UID: 001245547

PDB

Range: C:4-153
PDB: 2DDB chain C(all domains)
UniProt: Q8AVA3 (all domains)

Molecule: Pseudecin

3D Structure

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Related Domains

Browse other domains in CAP →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPR-1-like(273)

HH-groupPR-1-like(273.1)

TT-groupPR-1-like(273.1.1)

FFamilyCAP(273.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL

Pfam Families

Cysteine-rich secretory protein family

ClanCL0659CAP

External Links

ECOD PDB View: 2DDB RCSB PDB: 2DDB PDBe: 2DDB UniProt: Q8AVA3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.