ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s2oA3 - ECOD Domain | ECOD

ECOD/Domains/e3s2oA3

e3s2oA3

UID: 001249409

PDB

Range: A:-1-183
PDB: 3S2O chain A(all domains)
UniProt: P56817 (all domains)
Gene: BACE1

Molecule: Beta-secretase 1

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

(3S)-3-(2-amino-5-chloro-1H-benzimidazol-1-yl)-N-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]pentanamideEV6
Iodide ionIOD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 3S2O RCSB PDB: 3S2O PDBe: 3S2O UniProt: P56817

Downloads

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