ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jooA3 - ECOD Domain | ECOD

ECOD/Domains/e4jooA3

e4jooA3

UID: 001249543

PDB

Range: A:45-231
PDB: 4JOO chain A(all domains)
UniProt: P56817 (all domains)
Gene: BACE1

Molecule: Beta-secretase 1

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

(4R)-2'-amino-6-bromo-1',2,2-trimethyl-2,3-dihydrospiro[chromene-4,4'-imidazol]-5'(1'H)-one1M4
NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 4JOO RCSB PDB: 4JOO PDBe: 4JOO UniProt: P56817

Downloads

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