ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lxmC3 - ECOD Domain | ECOD

ECOD/Domains/e4lxmC3

e4lxmC3

UID: 001249643

PDB

Range: C:46P-183
PDB: 4LXM chain C(all domains)
UniProt: P56817 (all domains)
Gene: BACE1

Molecule: Beta-secretase 1

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

(1S,3S,4S,5R)-3-{4-amino-3-fluoro-5-[(1,1,1,3,3,3-hexafluoropropan-2-yl)oxy]benzyl}-5-[(3-tert-butylbenzyl)amino]tetrahydro-2H-thiopyran-4-ol 1-oxide1YU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 4LXM RCSB PDB: 4LXM PDBe: 4LXM UniProt: P56817

Downloads

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