ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dsdA4 - ECOD Domain | ECOD

ECOD/Domains/e4dsdA4

e4dsdA4

UID: 001249954

PDB

Range: A:92-146
PDB: 4DSD chain A(all domains)
UniProt: A7M5Y8 (all domains)

Molecule: putative periplasmic protein

3D Structure

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Related Domains

Browse other domains in PepSY_like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupBLIP-like(809)

HH-groupBT0923-like(809.2)

TT-groupBT0923-like(809.2.1)

FFamilyPepSY_like(809.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11396PepSY_like

Putative beta-lactamase-inhibitor-like, PepSY-like

ClanCL0320PepSY

External Links

ECOD PDB View: 4DSD RCSB PDB: 4DSD PDBe: 4DSD UniProt: A7M5Y8

Downloads

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