ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hznA3 - ECOD Domain | ECOD

ECOD/Domains/e4hznA3

e4hznA3

UID: 001250266

PDB

Range: A:11-203
PDB: 4HZN chain A(all domains)
UniProt: Q8GGP1 (all domains)
Gene: LnmK

Molecule: Bifunctional Methylmalonyl-CoA:ACP Acyltransferase/Decarboxylase

3D Structure

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Related Domains

Browse other domains in LnmK_N_HDF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThioesterase/thiol ester dehydrase-isomerase-like(222)

HH-groupThioesterase/thiol ester dehydrase-isomerase(222.1)

TT-groupThioesterase/thiol ester dehydrase-isomerase(222.1.1)

FFamilyLnmK_N_HDF(222.1.1.13)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Tromethamine, Sulfate ion)

GlycerinGOL
DrugBank DB09462
TromethamineTRS
DrugBank DB03754
Sulfate ion

Pfam Families

PF18238LnmK_N_HDF

LnmK N-terminal Hot Dog Fold domain

ClanCL0050HotDog

External Links

ECOD PDB View: 4HZN RCSB PDB: 4HZN PDBe: 4HZN UniProt: Q8GGP1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.