ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ga5A2 - ECOD Domain | ECOD

ECOD/Domains/e3ga5A2

e3ga5A2

UID: 001252809

PDB

Range: A:3-110,A:257-307
PDB: 3GA5 chain A(all domains)
UniProt: P23905 (all domains)
Gene: mglB

Molecule: D-galactose-binding periplasmic protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
(2R)-2,3-dihydroxypropyl beta-D-galactopyranosideRGG
Thiocyanate ionSCN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 3GA5 RCSB PDB: 3GA5 PDBe: 3GA5 UniProt: P23905

Downloads

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